BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E11SP1|AL424985
(90 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 173 5e-44
>3x_Contig1807
Length = 66587
Score = 173 bits (86), Expect = 5e-44
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 1 gagttttaactacaaccaacactactgtygtacttggctcatcagaagcttcgtataccg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 30339 gagttttaactacaaccaacactactgtcgtacttggctcatcagaagcttcgtataccg 30398
Query: 61 tctctgtkgtgtacgttgaagtgaatgttt 90
||||||| ||||||||||||||||||||||
Sbjct: 30399 tctctgtggtgtacgttgaagtgaatgttt 30428
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 330
Number of Sequences: 1807
Number of extensions: 330
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 90
length of database: 10,358,551
effective HSP length: 15
effective length of query: 75
effective length of database: 10,331,446
effective search space: 774858450
effective search space used: 774858450
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 48 (97.1 bits)